When reading papers about agent-based models / individual-based models, I am always curious if the model can be reproduced from the description in said paper. Specifically whether there is sufficient information in the paper to reproduce the model and the results. Often we task students with such a task as a learning exercise and I thought it would be nice to show you one such example done by Dale Brearcliffe.
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Graphical User Interface of Reproduced Model |
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Nest composition and development in the original model (Source: Hogeweg and Hesper, 1983). |
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Nest composition and development in the reproduced model. |
Full Reference:
Hogeweg, P. and Hesper, B. (1983), ‘The Ontogeny of the Interaction Structure in Bumble Bee Colonies: A MIRROR Model’, Behavioral Ecology and Sociobiology, 12(4): 271-283.
For those interested in reproduction and replication have a look at the following articles:
Axtell, R., Axelrod, R., Epstein, J.M. and Cohen, D. (1996), ‘Aligning Simulation Models: A Case Study and Results‘, Computational and Mathematical Organization Theory, 1(2): 123-141.
Drummond, C. (2009), ‘Replicability is Not Reproducibility: Nor is it Good Science‘, Proceedings of the 4th Workshop on Evaluation Methods for Machine Learning at the 26th International Conference on Machine Learning, Montreal, Canada.
Wilensky, U. and Rand, W. (2007), ‘Making Models Match: Replicating an Agent-Based Model’, Journal of Artificial Societies and Social Simulation, 10(4): 2, Available at http://jasss.soc.surrey.ac.uk/10/4/2.html.
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